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  Course Description
Course Name : Cytogenetics

Course Code : BY-552

Course Type : Optional

Level of Course : Second Cycle

Year of Study : 1

Course Semester : Spring (16 Weeks)

ECTS : 6

Name of Lecturer(s) : Prof.Dr. MEHMET TOPAKTAŞ

Learning Outcomes of the Course : 1. Teaches the required cytogenetic methods to conduct studies in plants, humans, mice and rats. 2. Conducts cytogenetic investigationş.

Mode of Delivery : Face-to-Face

Prerequisites and Co-Prerequisites : None

Recommended Optional Programme Components : None

Aim(s) of Course : Teaching cytogenetic techniques to examine plant, human and animal chromosomes.

Course Contents : Can be found in lecture course.

Language of Instruction : Turkish

Work Place : Seminar hall and genetics laboratory.


  Course Outline /Schedule (Weekly) Planned Learning Activities
Week Subject Student's Preliminary Work Learning Activities and Teaching Methods
1 Plant karyotypes. Board and pencil. Theoretical lecture.
2 Establishing permanent preparations from the root tips to examine and determine cytogenetic abnormalities in mitosis. Rooting the onion (bulb), preparing alcohol material and permanent slides from these roots. Feulgen squash method.
3 Establishing permanent slides by squash method from anthers to examine meiosis in pollen mother cells. Preparing alcohol material from plant buds. Staining of pollen mother cells with aceto orsein.
4 Establishing permanent slides by squash method from anthers to examine meiosis in pollen mother cells. Establishing permanent slides from alcohol material. Feulgen squash method.
5 Establishing blood cultures from human blood and preparation of permanent slides to examine chromosome aberrations in man. Taking peripheral blood from human and the inoculation of blood to chromosome medium in sterile culture tubes. Establishing microscope slides using standart preparation techniques after 72 hour incubation.
6 Establishing blood cultures from human blood and preparation of permanent slides to examine chromosome aberrations in man. Microscopic examination and ready-to-examine permanent slides. Analysis of human chromosomes at 1000x magnification.
7 Establishing blood cultures from human blood and preparation of permanent slides to examine sister chromatid exchange (SCE). Preparation of BrdUrd solution. 72-hr incubation of BrdUrd-added whole blood culture. Method of Speit (1984)
8 Midterm exam. Written examination. Evaluation of written examination.
9 Examination of slides to analyze SCE. Microscopic examination and ready-to-examine permanent slides. Counting SCE numbers in permanent slides.
10 Various banding methods on human chromosomes. Board and pencil. Theoretical lecture.
11 Various banding methods on human chromosomes. Board and pencil. Theoretical lecture.
12 Establishing preparations to examine the X and Y chromosomes. Theoretical lecture. Explaining the subject using figures.
13 Establishing preparations to examine the X and Y chromosomes. Preparing clean slides, spatule and other solutions. Establishing preprations from buccal mucosa cells.
14 In vivo cytogenetic studies in rat bone marrow cells. Theoretical lecture of preparation from rat bone marrow. Explaining standart preparation technique for the analysis of chromosomes in bone marrow cells.
15 In vivo cytogenetic studies in rat bone marrow cells. Microscopic examination and ready-to-examine permanent slides. Analysis of human chromosomes at 1000x magnification
16/17 Final exam. Written examination. Evaluation of written examination.


  Required Course Resources
Resource Type Resource Name
Recommended Course Material(s)  Cytogenetics (2010), Topaktaş, M; Rencüzoğulları, E. (Nobel Yayın Dağıtım,176 s., Ankara).
Required Course Material(s)


  Assessment Methods and Assessment Criteria
Semester/Year Assessments Number Contribution Percentage
    Mid-term Exams (Written, Oral, etc.) 1 60
    Homeworks/Projects/Others 1 40
Total 100
Rate of Semester/Year Assessments to Success 40
 
Final Assessments 100
Rate of Final Assessments to Success 60
Total 100

  Contribution of the Course to Key Learning Outcomes
# Key Learning Outcome Contribution*
1 Has the advanced hypothetical and applied knowledges in biology field 5
2 Based on the bachelor´s level of qualification, develops and deepens the knowledge as a specialist in the biology 5
3 Uses the theoretical and practical knowledge he expertises in biology 5
4 Integrates and interprets the knowledge from different disciplines by his expertise in biology and generates new information. 5
5 Solves the problems of biology by using research methods. 5
6 Carries out an independent study requires expertise on biology 5
7 Develops and produces new strategic approaches and solves the unexpected problems in biology area by taking responsibilty 5
8 Assesses the knowledge he expertises through critical approach and makes leadership solving problems related to biological environments. 5
9 Systematically transfers the current developments in the field of biology and his/her studies to the person in biology field or other related fields by supporting qualitative and quantitative data 5
10 Uses at least one foreign language to keep up to date with the field to take part in scientific and social interaction groups to share information at international levels 0
11 Uses information and communication technologies as required in the biology field 0
12 In biology, uses statistical software programme to carry out scientific research and also uses information and communication technology in proficiency level of knowledge and skills to critically evaluate 1
13 Develops the strategy, policy and implementation plans in the issues related to the field of biology and treats the results obtained within standart of quality 4
14 Uses the knowledge, problem solving, and / or practical skills obtained in the Biology Field in interdisciplinary studies. 5
15 Oversees social, scientific, cultural and ethical values in order to collect, implement, interpret data in the Biology area 4
16 Has the ability to formulate and solve the problems of biology in advanced level 4
17 Has ability to use his advanced knowledge in biology field for thinking systematically and solve problems in multidisciplinary approaches 5
* Contribution levels are between 0 (not) and 5 (maximum).

  Student Workload - ECTS
Works Number Time (Hour) Total Workload (Hour)
Course Related Works
    Class Time (Exam weeks are excluded) 14 4 56
    Out of Class Study (Preliminary Work, Practice) 14 2 28
Assesment Related Works
    Homeworks, Projects, Others 1 1 1
    Mid-term Exams (Written, Oral, etc.) 1 25 25
    Final Exam 1 50 50
Total Workload: 160
Total Workload / 25 (h): 6.4
ECTS Credit: 6